{"id":222,"date":"2016-07-25T14:48:36","date_gmt":"2016-07-25T21:48:36","guid":{"rendered":"https:\/\/ichthyology.mlml.calstate.edu\/?page_id=222"},"modified":"2017-12-10T16:04:47","modified_gmt":"2017-12-11T00:04:47","slug":"publications","status":"publish","type":"page","link":"https:\/\/mlml.sjsu.edu\/ichthyology\/publications\/","title":{"rendered":"Publications"},"content":{"rendered":"
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Here you will find publications that have come out of the Ichthyology Lab<\/strong><\/h3>\n<\/div>\n<\/div><\/div><\/div><\/div>

2017<\/h3>\n
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2017<\/strong>.\u00a0\u00a0<\/em>Hamilton SL, Logan CA, Fennie HW, Sogard SM, Barry JP, Makukhov AD, Tobosa LR, Boyer K, Lovera CF, Bernardi G. Species-specific responses of juvenile rockfish to elevated\u00a0p<\/i>CO2<\/sub>: From behavior to genomics. PLoS ONE 12(1): e0169670. doi:10.1371\/journal.pone.0169670. Open Access Link<\/a><\/p>\n<\/div>\n<\/div><\/div><\/div><\/div>

2016<\/h3>\n
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2016<\/strong>.\u00a0 <\/em>Graham MH, Fox MD, Hamilton SL. Macrophyte productivity and the provisioning of energy and habitat to nearshore systems. Book Chapter in: Marine Macrophytes as Foundation Species. Editor: Olafsson, E. CRC Press, Boca Raton, FL. Pgs 131-160.<\/p>\n<\/div>\n<\/div><\/div><\/div><\/div>

2015<\/h3>\n
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2015<\/strong>.\u00a0 Kram SL, Price NN, Donham EM, Johnson MD, Kelly ELA, Hamilton SL, Smith JE. <\/em>Variable responses of temperate calcified and fleshy macroalgae to elevated pCO2<\/sub> and warming. ICES Journal of Marine Science; doi: 10.1093\/icesjms\/fsv168. <\/em>pdf<\/a><\/p>\n

2015<\/strong>.\u00a0 Caselle JE, Rassweiler AR, Hamilton SL, Warner RR. <\/em>Recovery trajectories of kelp forest animals are rapid yet spatially variable across a network of temperate marine protected areas. Scientific Reports<\/em> 15:14102 DOI:10.103\/srep14102. pdf<\/a><\/p>\n

2015<\/strong>. Hamilton SL, Caselle JE. Exploitation and recovery of a sea urchin predator has implications for the resilience of southern California kelp forests. Proceedings of the Royal Academy of Science B: Biological Sciences <\/em>282: 20141817. pdf<\/a><\/p>\n<\/div>\n<\/div><\/div><\/div><\/div>

2014<\/h3>\n
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2014<\/strong>. Hamilton SL, Smith JE, Price NN, Sandin SA. Quantifying patterns of fish herbivory on Palmyra Atoll (USA), an uninhabited predator-dominated central Pacific coral reef. Marine Ecology Progress Series<\/em> 501: 141-155. pdf<\/a><\/p>\n

2014<\/strong>. Hamilton SL, Newsome SD, Caselle JE. Dietary niche expansion of a kelp forest predator recovering from intense commercial exploitation. Ecology<\/em> 95: 164-172. pdf<\/a><\/p>\n<\/div>\n<\/div><\/div><\/div><\/div>

2013<\/h3>\n
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2013<\/strong>. Max LM, Hamilton SL, Gaines SD, Warner RR. Benthic processes and overlying fish assemblages drive the composition of benthic detritus on a central Pacific coral reef. Marine Ecology Progress Series. 482: 181-195. pdf<\/a><\/p>\n<\/div>\n<\/div><\/div><\/div><\/div>

2012<\/h3>\n
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2012<\/strong>. Loke KA, Floyd AJ, Lowe CG, Hamilton SL, Caselle JE, Young KA. in press. Reassessment of the fecundity of California sheephead. Marine and Coastal Fisheries 4: 599-604. pdf<\/a><\/p>\n

2012<\/strong>. Manr\u00edquez PH, Galaz SP, Opitz T, Hamilton SL, Paradis G, Warner RR, Castilla JC, Labra FA, Lagos NA. Geographic variation in trace-elemental signatures in the statoliths of near-hatch larvae and recruits of Loco (Concholepas concholepas). Marine Ecology Progress Series 448: 105-118. pdf<\/a><\/p>\n

2012<\/strong>. Walsh SM, Hamilton SL, Ruttenberg BI, Donovan MK, Sandin SA. Fishing top predators indirectly affects condition and reproduction in a reef fish community. Journal of Fish Biology. 80: 519-537. DOI: 10.1111\/j.1095-8649.2011.03209.x. pdf<\/a><\/p>\n<\/div>\n<\/div><\/div><\/div><\/div>

2011<\/h3>\n
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2011<\/strong>. Price NN, Smith JE, Hamilton SL, Tootell JS. Species-specific consequences of ocean acidification for the calcareous tropical green algae Halimeda. Marine Ecology Progress Series. 440: 67-78. pdf<\/a><\/p>\n

2011<\/strong>. Hamilton SL, Wilson J, Ben-horin T, Caselle JE. Utilizing spatial demographic and life history variation to optimize sustainable yield of a temperate sex-changing fish. PLoS ONE 6(9): e24580. doi:10.1371\/journal.pone.0024580. pdf<\/a><\/p>\n

2011<\/strong>. Ruttenberg BI, Hamilton SL, Walsh SM, Donovan M, Friedlander AM, DeMartini EE, Sandin SA. Predator induced demographic shifts in coral reef fish communities. PLoS ONE 6(6): e21062. doi:10.1371\/journal.pone.0021062. pdf<\/a><\/p>\n

2011<\/strong>. Hamilton SL, Caselle JE, Lantz CA, Egglof TL, Kondo E, Newsome SD, Loke-Smith K, Pondella DP, Young K, Lowe C. Extensive geographic and ontogenetic variation characterizes the trophic ecology of a temperate reef fish on southern California rocky reefs. Marine Ecology Progress Series 429: 227-244. pdf<\/a><\/p>\n

2011<\/strong>. Caselle JE, Hamilton SL, Schroeder DM, Love MS, Standish JD, Rosales-Casian JA, Sosa-Nishizaki O. Geographic variation in density, demography, and life history traits of a harvested temperate sex-changing reef fish. Canadian Journal of Fisheries and Aquatic Science 68: 288-303. pdf<\/a><\/p>\n<\/div>\n<\/div><\/div><\/div><\/div>

2010<\/h3>\n
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2010<\/strong>. Hamilton SL, Caselle JE, Malone D, Carr MH. Incorporating biogeography into evaluations of the Channel Islands marine reserve network. Proceedings of the National Academy of Sciences USA 107: 18272-18277 [doi\/10.1073\/pnas.0908091107]. pdf<\/a><\/p>\n

2010<\/strong>. White JW, Samhouri JF, Stier AC, Wormald CL, Hamilton SL, Sandin SA. Synthesizing mechanisms of density dependence in reef fishes: behavior, habitat configuration, and observation scale. Ecology 91: 1949-1961. pdf<\/a><\/p>\n<\/div>\n<\/div><\/div><\/div><\/div>

2009<\/h3>\n
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2009<\/strong>. Hamilton SL, Warner RR. Otolith profiles of barium verify the timing of settlement in a coral reef fish. Marine Ecology Progress Series 385: 237-244. pdf<\/a><\/p>\n

2009<\/strong>. Warner RR, Hamilton SL, Sheehy MS, Zeidberg LD, Brady BC, Caselle JE. Geographic variation in natal and early larval trace-elemental signatures in the statoliths of market squid, Doryteuthis (formerly Loligo) opalescens. Marine Ecology Progress Series 379: 109-121. pdf<\/a><\/p>\n<\/div>\n<\/div><\/div><\/div><\/div>

2008<\/h3>\n
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2008<\/strong>. Hamilton SL, Regetz J, Warner RR. Post-settlement survival linked to larval-life in a marine fish. Proceedings of the National Academy of Sciences USA 105: 1561-1566. pdf<\/a><\/p>\n

2008<\/strong>. Hamilton SL. Larval history influences post-metamorphic condition in a coral reef fish. Oecologia 158: 449-461. pdf<\/a><\/p>\n

2008<\/strong>. Ruttenberg BI, Hamilton SL, Warner RR. Spatial and temporal variation in the natal otolith chemistry of a Hawaiian reef fish: prospects for measuring population connectivity. Canadian Journal of Fisheries and Aquatic Science 65: 1181-1192. pdf<\/a><\/p>\n<\/div>\n<\/div><\/div><\/div><\/div>

2007<\/h3>\n
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2007<\/strong>. Hamilton SL, Caselle JE, Standish JD, Schroeder DM, Love MS, Rosales-Casian JA, Sosa-Nishizaki O. Size-selective harvesting alters life histories of a temperate sex-changing fish. Ecological Applications 17: 2268-2280. pdf<\/a><\/p>\n<\/div>\n<\/div><\/div><\/div><\/div>

2006<\/h3>\n
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2006<\/strong>. Hamilton SL, White JW, Swearer SE, Caselle JE, Warner RR. Consistent long-term spatial gradients in replenishment for an island population of a coral reef fish. Marine Ecology Progress Series 306: 247-256. pdf<\/a><\/p>\n<\/div>\n<\/div><\/div><\/div><\/div>

2005<\/h3>\n
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2005<\/strong>. Ruttenberg BI, Hamilton SL,Hickford MJH, Paradis GL, Sheehy MS, Standish JD, Ben-Tzvi O, Warner RR. Elevated levels of trace elements in cores of otoliths and their potential for use as natural tags. Marine Ecology Progress Series 297: 273-281. pdf<\/a><\/p>\n

2005<\/strong>. Sandin SA, Regetz J, Hamilton SL. Testing larval fish dispersal hypotheses using maximum likelihood analysis of otolith microchemistry data. Marine and Freshwater Research 56: 725-734. pdf<\/a><\/p>\n<\/div>\n<\/div><\/div><\/div><\/div>

2003<\/h3>\n
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2003<\/strong>. Caselle JE, Hamilton SL, Warner RR. The interaction of retention, recruitment, and density-dependent mortality in the spatial placement of marine reserves. Gulf and Caribbean Research 14: 107-117<\/p>\n<\/div>\n<\/div><\/div><\/div><\/div><\/div>","protected":false},"excerpt":{"rendered":"

Here you will find publications that have come out of the Ichthyology Lab 2017.\u00a0\u00a0Hamilton SL, Logan CA, Fennie HW, Sogard SM, Barry JP, Makukhov AD, Tobosa LR, Boyer K, Lovera CF, Bernardi G. Species-specific responses of juvenile rockfish to elevated\u00a0pCO2: From behavior to genomics. PLoS ONE 12(1): e0169670. doi:10.1371\/journal.pone.0169670. Open Access Link<\/p>\n","protected":false},"author":109,"featured_media":0,"parent":0,"menu_order":0,"comment_status":"closed","ping_status":"closed","template":"","meta":{"footnotes":""},"categories":[],"tags":[],"class_list":["post-222","page","type-page","status-publish","hentry"],"distributor_meta":false,"distributor_terms":false,"distributor_media":false,"distributor_original_site_name":"Ichthyology","distributor_original_site_url":"https:\/\/mlml.sjsu.edu\/ichthyology","push-errors":false,"_links":{"self":[{"href":"https:\/\/mlml.sjsu.edu\/ichthyology\/wp-json\/wp\/v2\/pages\/222","targetHints":{"allow":["GET"]}}],"collection":[{"href":"https:\/\/mlml.sjsu.edu\/ichthyology\/wp-json\/wp\/v2\/pages"}],"about":[{"href":"https:\/\/mlml.sjsu.edu\/ichthyology\/wp-json\/wp\/v2\/types\/page"}],"author":[{"embeddable":true,"href":"https:\/\/mlml.sjsu.edu\/ichthyology\/wp-json\/wp\/v2\/users\/109"}],"replies":[{"embeddable":true,"href":"https:\/\/mlml.sjsu.edu\/ichthyology\/wp-json\/wp\/v2\/comments?post=222"}],"version-history":[{"count":5,"href":"https:\/\/mlml.sjsu.edu\/ichthyology\/wp-json\/wp\/v2\/pages\/222\/revisions"}],"predecessor-version":[{"id":3521,"href":"https:\/\/mlml.sjsu.edu\/ichthyology\/wp-json\/wp\/v2\/pages\/222\/revisions\/3521"}],"wp:attachment":[{"href":"https:\/\/mlml.sjsu.edu\/ichthyology\/wp-json\/wp\/v2\/media?parent=222"}],"wp:term":[{"taxonomy":"category","embeddable":true,"href":"https:\/\/mlml.sjsu.edu\/ichthyology\/wp-json\/wp\/v2\/categories?post=222"},{"taxonomy":"post_tag","embeddable":true,"href":"https:\/\/mlml.sjsu.edu\/ichthyology\/wp-json\/wp\/v2\/tags?post=222"}],"curies":[{"name":"wp","href":"https:\/\/api.w.org\/{rel}","templated":true}]}}